/mapfilter npc
/mapfilter pc
/melee stick=0
Not sure what you're really referring to when you're talking about the auto-attacking and using it for abilities. Are you talking about abilities listed under the holy/downshits, or are you talking about kick, bash, taunt, et cetera?
MQ2Melee only processing the melee abilities that it directly controls while you're attacking. It will process the statements under the holyshits only while you're attacking. It will process the statements under the downshits only while you're not attacking.