servers can be specified in the [Servers] section of your mq2autologin ini file
For example I have a bunch of emu servers added to mine:
as long as you specify EXACTLY what it says as its long name in the server select window, this works.
Rich (BB code):
[Servers]
beta=Beta
brekt=Brekt (Free Trade)
tunare=Tunare - The Seventh Hammer
drinal=Drinal - Maelin Starpyre
firiona=Firiona Vie (Roleplaying Preferred)
peqtgc=[] [PEQ]The Grand Creation [legit-oow]
ezserv=[] EZ Server - Custom Zones, Vendors, Quests, Items, etc
And to answer your question about shortnames for EMU servers, it doesn't matter, u can make it up yourself.
The only thing that matters is that it matches whatever u set as shortname in the profile. (And that the long name match)